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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T CABIN1 chr22:24407642-24574596:+ 0.71 8.4 5.17E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T CBX6 chr22:39257455-39268319:- 0.41 6.49 2.21E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T CBX7 chr22:39516172-39548679:- 0.46 5.97 4.71E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T CBY1 chr22:39052641-39069859:+ 0.76 9.46 1.41E-19 Box Plot
THCA rs5998366 chr22:32665525 C/T CCDC117 chr22:29168662-29185289:+ 0.63 7.06 5.81E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T CCDC134 chr22:42196683-42222303:+ 0.76 7.1 4.5E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T CCDC157 chr22:30752624-30774647:+ 0.58 7.36 7.93E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T CECR5 chr22:17618401-17646158:- 0.64 6.95 1.24E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T CHEK2 chr22:29083731-29138410:- 0.51 6.39 3.92E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T CHKB chr22:51017378-51039884:- 0.65 6.38 4.07E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T CHKB-CPT1B chr22:51007298-51021394:- 0.38 6.66 7.66E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T COMT chr22:19929130-19957498:+ 0.62 6.99 9.41E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T CREBL2 chr12:12764761-12798042:+ -0.51 -6.03 3.36E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T CRKL chr22:21271714-21308037:+ 0.83 8.98 6.37E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T CSNK1E chr22:38686697-38714089:- 0.54 7.03 7.21E-12 Box Plot